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dc.contributor.authorRamesh, Ch
dc.contributor.authorAnwesh, M.
dc.contributor.authorAlessia, T.
dc.contributor.authorGiuffrida, D.
dc.contributor.authorLaTella, R.
dc.contributor.authorChiaia, V.
dc.contributor.authorMondello, L.
dc.contributor.authorAnil, Kanakam
dc.contributor.authorLeLoarer, A.
dc.contributor.authorGauvin-Bialecki, A.
dc.contributor.authorFouillaud, M.
dc.contributor.authorDufosse, L.
dc.date.accessioned2024-10-03
dc.date.accessioned2025-02-11T11:21:21Z
dc.date.available2024-08-06
dc.date.available2025-02-11T11:21:21Z
dc.date.issued2024
dc.identifier.citationCurrent Microbiology, vol.81(9); 2024; Article no: 298
dc.identifier.issn1432-0991
dc.identifier.otherhttps://link.springer.com/article/10.1007/s00284-024-03812-8
dc.identifier.urihttps://doi.org/10.1007/S00284-024-03812-8
dc.identifier.urihttp://drs.nio.res.in/drs/handle/2264/9380
dc.descriptionIF2023= 2.3
dc.description.abstractPigments and other secondary metabolites originating from marine microbes have been a promising natural colorants and drugs for multifaceted applications. However, marine actinobacteria producing such natural molecules are least investigated in terms of their taxonomy, chemical diversity and applications in biomedical, textile, and food industries. In this study, sioxanthin pigment-producing Gram-positive actinobacteria, Micromonospora sp. strain SH-82 was isolated from a marine sponge, Scopalina hapalia, and its whole genome was analyzed. Strain SH-82is a prolific producer of diverse chemical molecules as it produced more compounds on A1 medium with different culture conditions. The genome size of SH-82 is 6.24 Mb (6,246,890 bp) carrying 23 identified biosynthetic gene clusters. A total of 5415 CDS, 60 tRNA, 9 rRNA, and 1 tmRNA are identified from SH-82 genome. The GC content (%) of whole genome was 71.6%. Strain SH-82 harbors genes encoding type I, type II, and type III polyketide synthases. Based on the multi-locus sequence analysis and fatty acid methyl ester (FAME) composition, strain SH-82 is confirmed as a novel species. The genetic information of Micromonospora sp. SH-82 has been deposited to NCBI under the BioProject ID PRJNA1087320, with corresponding identifiers in the Sequence Read Archive (SRA) as SAMN40439676 and the Genome accession as CP148049.
dc.languageen
dc.publisherSpringer
dc.relation.isreferencedbySCI
dc.rightsOnly the author version of the copright reserved papers uploaded. Contact drs@nio.org for any complaints regarding copyright violations
dc.titleGenome and compound analysis of sioxanthin-producing marine Actinobacterium Micromonospora sp. nov. Strain sh-82 isolated from sponge Scopalina hapalia
dc.typeJournal Article
dc.affiliation.authorCSIR-National Institute of Oceanography, Dona Paula, Goa, India


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